72654-7

LOINC 2.82

SNRPN gene 15q11 deletion and duplication mutation analysis [Identifier] in Blood or Tissue by FISH Nominal

SNRPN 15q11 Del+Dup Bld/T FISH

Definition

  • Approximately 70% of cases of Prader-Willi syndrome (PWS) are caused by paternal deletion of the 15q11-q13 region. This region includes the small nuclear ribonucleoprotein polypeptide N (SNRPN) gene. This code is based on, but not limited to, Kreatech Diagnostic's MD Prader-Willi SNRPN (15q11) region probe to detect copy numbers of the SNRPN gene region at 15q11. Labs may report the X number of cells out of Y number that have the probe deletion (or duplication), which is usually 100% if present (i.e. 20 out of 20, 100%). Result are reported in ISCN (International System for Human Cytogenetic Nomenclature) format. This test does not detect uniparental disomy (UPD, LOINC 34503-3), which may also cause PWS (and Angelman syndrome, AS).

Component

  • SNRPN gene 15q11 deletion+duplication

Specimen / system

  • Bld/Tiss

Class

  • MOLPATH.DEL

Property

  • Prid

Scale

  • Nom

Method

  • FISH

Related names

  • Amplification; Blood; Del; Del+Dup; Deletions; Dp; Fluorescent in situ hybridization; Genetics; HCERN3; Heredity; Heritable; Identity or presence; Inherited; Molecular pathology; MOLPATH; MOLPATH.DELETIONS; Nominal; Point in time; Prader Willi syndrome; PWCR; PWS; Random; RT-LI; small nuclear ribonucleoprotein polypeptide N; SM-D; SMN; sm-N; SNRNP-N; SNRPN 15q11; SNRPN 15q11 del+dup; SNURF-SNRPN; Tissue; Tissue, unspecified; WB; Whole blood; Whole blood or Tissue

Index terms

  • Amplification
  • Blood
  • Del
  • Del+Dup
  • Deletions
  • Dp
  • Fluorescent in situ hybridization
  • Genetics
  • HCERN3
  • Heredity
  • Heritable
  • Identity or presence
  • Inherited
  • Molecular pathology
  • MOLPATH
  • MOLPATH.DELETIONS
  • Nominal
  • Point in time
  • Prader Willi syndrome
  • PWCR
  • PWS
  • Random
  • RT-LI
  • SM-D
  • sm-N
  • small nuclear ribonucleoprotein polypeptide N
  • SMN
  • SNRNP-N
  • SNRPN 15q11
  • SNRPN 15q11 del+dup
  • SNRPN gene 15q11 deletion+duplication
  • SNURF-SNRPN
  • Tissue
  • Tissue, unspecified
  • WB
  • Whole blood
  • Whole blood or Tissue