85532-0

LOINC 2.82

Influenza virus A whole genome [Nucleotide sequence] in Isolate by Sequencing

FLUAV whole genome Islt-Seq

Definition

  • The Influenza A virus genome is contained on eight RNA segments. Segments 1-3 encode RNA polymerase subunits (segment 1 - PB2, segment 2 - PB1 and the PB1-F2 protein and segment 3 - PA). Segment 4 encodes for hemagglutinin (HA). HA is a determinant in the severity of a viral infection. Segment 5 encodes a nucleoprotein (NP) Segment 6 encodes neuraminidase (NA) Segment 7 encodes two matrix proteins (M1 and M2) Segment 8 encodes two distinct non-structural proteins (NS1 and NEP) Segments that encode multiple proteins due so by using different reading frames from the same RNA segment. [PMID: 19230160The result of this test is the raw amino acid sequence of the virus.

Component

  • Influenza virus A whole genome

Specimen / system

  • Isolate

Class

  • MICRO

Property

  • Seq

Scale

  • Nom

Method

  • Sequencing

Related names

  • Avian influenza; Bird flu; FLUA; FLUAV; FLUAV whole genome; FLUV; Fowl plague; high-throughput sequencing; HTS; ID; Infectious Disease; InfectiousDisease; Influ; Influenza A; Influenza A virus; Islt; Isol; Microbiology; Next generation sequencing; NGS; Nominal; Point in time; Random; Vet; Veterinary

Index terms

  • Avian influenza
  • Bird flu
  • FLUA
  • FLUAV
  • FLUAV whole genome
  • FLUV
  • Fowl plague
  • high-throughput sequencing
  • HTS
  • ID
  • Infectious Disease
  • InfectiousDisease
  • Influ
  • Influenza A
  • Influenza A virus
  • Islt
  • Isol
  • Microbiology
  • Next generation sequencing
  • NGS
  • Nominal
  • Point in time
  • Random
  • Vet
  • Veterinary