96741-4LOINC 2.82
SARS-CoV-2 (COVID-19) variant [Type] in Specimen by Sequencing
SARS-CoV-2 variant Spec Seq
Definition
- For reporting the SARS-CoV-2 variant strain identified, various codes are available in LOINC depending on the nomenclature used. For the most general code (nomenclature unspecified), use SARS-CoV-2 (COVID-19) variant [Type] in specimen by sequencing (this term) or by nucleic acid amplification (NAA) with probe-based detection [LOINC: 100156-9]. To report the lineage for the variant, use SARS-CoV-2 (COVID-19) lineage [Type] in Specimen [LOINC: 96895-8] (method unspecified). To report the clade for the variant, use SARS-CoV-2 (COVID-19) clade [Type] in Specimen [LOINC: 96896-6] (method unspecified).
Component
- SARS coronavirus 2 variant
Specimen / system
- XXX
Class
- MICRO
Property
- Type
Scale
- Nom
Method
- Sequencing
Related names
- 2019 Novel Coronavirus; 2019-nCoV; Corona virus; COVID19; COVID-19; high-throughput sequencing; HTS; ID; II; Infectious Disease; InfectiousDisease; Microbiology; Misc; Miscellaneous; Next generation sequencing; NGS; Nominal; Other; Point in time; Random; SARS Coronavirus 1; SARS-CoV; SARS-CoV-1; SARS-CoV-2; SARS-CoV-2 strain; SARS-CoV-2 variant; Severe Acute Respiratory Syndrome; Spec; To be specified in another part of the message; Typ; Unspecified; Viral Pneumonias; VOC 202012/01; Wuhan coronavirus
Index terms
- 2019 Novel Coronavirus
- 2019-nCoV
- Corona virus
- COVID-19
- COVID19
- high-throughput sequencing
- HTS
- ID
- II
- Infectious Disease
- InfectiousDisease
- Microbiology
- Misc
- Miscellaneous
- Next generation sequencing
- NGS
- Nominal
- Other
- Point in time
- Random
- SARS Coronavirus 1
- SARS coronavirus 2 variant
- SARS-CoV
- SARS-CoV-1
- SARS-CoV-2
- SARS-CoV-2 strain
- SARS-CoV-2 variant
- Severe Acute Respiratory Syndrome
- Spec
- To be specified in another part of the message
- Typ
- Unspecified
- Viral Pneumonias
- VOC 202012/01
- Wuhan coronavirus